Home (CZ) | Teaching (CZ) | BESEDA | NMST552 |
Rko (CZ) |
Jointly taught with prof. RNDr. Marie Hušková, DrSc.
Language of both lectures and all exercise classes is English if and only if there is at least one officially subscribed student who is not enrolled in the Czech study programme.
| Lecture: | Monday 9:00 in K6 |
| Exercise class: | Monday 10:40 in K6 |
| Přednáška, prof. Marie Hušková | ||
| Slidy 1: PDF | ||
| Slidy 2: PDF | ||
| Slidy 3: PDF | ||
| Slidy 4: PDF | ||
| Slidy 5: PDF | ||
| Slidy 6: PDF | ||
| Přednáška, doc. Arnošt Komárek | |||
| Slidy: | PDF poslední změna: 5.10.2021 | ||
| R skript: | Vaha_lehkych.R | ||
| Přednáška 1: | Poznámky –– | Video (97 min) (Stream) | Čmáranice (PDF) |
| Přednáška 2: | Poznámky 1 (PDF) | Video 1 (105 min) (Stream) | Čmáranice 1 –– |
| Poznámky 2 (PDF) | Video 2 (79 min) (Stream) | Čmáranice 2 –– | |
| Přednáška 3: | Poznámky 1 (PDF) | Video 1 (93 min) (Stream) | Čmáranice 1 (PDF) |
| Poznámky 2 (PDF) | Video 2 (89 min) (Stream) | Čmáranice 2 (PDF) | |
| Přednáška 4: | Poznámky (PDF) | Video (84 min) (Stream) | Čmáranice (PDF) |
| Přednáška 5: | –– | Video (102 min) (Stream) | Čmáranice (PDF) |
| Přednáška 6: | |||
| Poznámky 1 –– | Video 1 (62 min) (Stream) | Čmáranice 1 (PDF) | |
| Poznámky 2 –– | Video 2 (92 min) (Stream) | Čmáranice 2 (PDF) | |
| Cvičení, doc. Arnošt Komárek | |||
| Cvičení teor. 1: | Poznámky (PDF) | Video (75 min) (Stream) | |
| Cvičení teor. 2: | Poznámky (PDF) | Video (65 min) (Stream) | |
| Cvičení teor. 3: | Poznámky (PDF) | Video (91 min) (Stream) | |
| Cvičení teor. 4: | Poznámky (PDF) | Video (83 min) (Stream) | |
| Cvičení domácí 1: | Zadání (PDF) | ||
| Cvičení softwarové: | Video 1 (89 min) (Stream) | Video 2 (89 min) (Stream) | |
| R skript (R skript) | Dataset (mastitis.RData) | ||
| Cvičení domácí 2: | Zadání (PDF) | Dataset (toenail.txt) | |
| Video (52 min) (Stream) | Čmáranice (PDF) | ||
| Cvičení domácí 3: | Zadání (PDF) | Dataset (Cars2004.RData) | |
| Video (79 min) (Stream) | Čmáranice (PDF) | ||
Next to R, we will also use JAGS (Just Another Gibbs Sampler) which can be downloaded (for various platforms) here (latest version seems optimal, read README first...):
| Source code (to compile) |
| DEB for Debian Linux |
| Package for Ubuntu Linux |
| RPM based Linux distributions |
| Mac OS X |
| Windows bin |
User manual to JAGS can be found here. Installation manual (if needed) is here. Examples of JAGS analyzes are here. As a study material, practical exercises from the short course given at UseR conference can be useful. Solutions to the exercises are here.
To be able to call JAGS from R, package runjags available in a standard way from CRAN is needed.
| Hušková, M. (1985). | |
| Bayesovské metody (course notes in Czech). | |
| Praha: Univerzita Karlova v Praze. | |
| Robert, C. P. (2001, 2007). | |
| The Bayesian Choice: From Decision-Theoretic Foundations | |
| to Computational Implementation, Second Edition. | |
| New York: Springer. | Full PDF (used to be available from the IP addresses of MFF UK) |
| Marin, J.-M., Robert, C. P. (2007). | |
| Bayesian Core: A Practical Approach to Computational Bayesian Statistics. | |
| New York: Springer. | Full PDF (used to be available from the IP addresses of MFF UK) |
| Gelman, A., Carlin, J. B., Stern, H. S., Rubin, D. B., Dunson, D. B. (2014). | |
| Bayesian Data Analysis, Third Edition. | |
| Boca Raton: Chapman & Hall/CRC. | Information on the publisher's web |
| Carlin, B. P., Louis, T. A. (2008). | |
| Bayesian Methods for Data Analysis, Third Edition. | |
| Boca Raton: Chapman & Hall/CRC. | Information on the publisher's web |
| Robert, C. P., Casella, G. (2004). | |
| Monte Carlo Statistical Methods, Second Edition. | |
| New York: Springer. | Information on the publisher's web |